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Chunk #9 — 3. Methods — 3.1. Statistical Analysis for Single Trait

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NCK2 is significantly associated with opiates addiction in African-origin men.
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The SNP-based association is performed by the standard allelic test and logistic regression to obtain the P values for individual SNPs, and PLINK software (version 1.07) was used for analysis [58]. Meanwhile, a list of SNP pairs in linkage disequilibrium (LD) (r 2 > 0.2) is calculated for the gene-based association test.