Three pseudo-GWAS panels were created based on three chip lists (see URLs) : The Illumina Omni 5M SNP array (HumanOmni5-4v1-1_A), the Illumina Omni 1M SNP array (Human1M-Duo v3C), and the Illumina Core Exome SNP array (humancoreexome-12v1-1_a). For these comparisons we only used sites in the intersection of the reference panels to enable a direct comparison.
