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Chunk #24 — Results — LD patterns in the admixed samples are more similar to each other than to EA samples

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Generalizing polygenic risk scores from Europeans to Hispanics/Latinos.
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Table 2 reports how often each training sample (EA or training ADM) provided a tag SNP having higher LD with the true causal SNP in the test ADM dataset. The tag SNPs in CEU and the training ADM population were often the same (46-50% of the time). When they differed, the tag SNP identified in the training ADM population was usually a better tag of the causal SNP in the test ADM population.