Twin, family and adoption studies have revealed an unambiguous role for genetic factors in the aetiology of complex neurodevelopmental disorders that can even exceed an estimated heritability of 90% (in autism; Table 2). Although a genetic component is thus clearly involved in the aetiology of a complex neurodevelopmental disorder, it is still elusive which gene (or genes) is responsible for its pathogenesis. Historically, the dopamine and also the glutamate neurotransmission system have often been implicated to play a role in neurodevelopmental pathogenesis. However, since many recently identified susceptibility genes have been found not to be related to either of the two neurotransmitter systems, restriction to these systems is no longer justified. To identify susceptibility genes and to better understand the pathophysiology of complex neurodevelopmental disorders, many studies utilizing genetic, biochemical, pharmacological, neurological and cognitive neuroscience techniques have been performed. In this section, we summarize the genetic approaches that have been used to identify risk factors at specific loci and genes.