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Chunk #56 — Results and discussion — Comparative benchmarks — Benchmark for RNA sequencing data

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Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
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The absolute number of calls for the evaluation and verification sets can be seen in Additional file 1: Figures S21 and S22, which mostly matched the order seen in the sensitivity plot of Figure 8. Additional file 1: Figures S23 and S24 provide heat maps and clustering based on the Jaccard index of calls for one replicate of the evaluation and verification sets, indicating a large overlap of calls across the different algorithms.