Chunk #8 — MATERIALS AND METHODS — Genotyping and data cleaning
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The Yale-Penn samples were genotyped on the Illumina HumanOmni1-Quad v1.0 microarray at CIDR and the Yale Center for Genome Analysis. SAGE samples were genotyped at CIDR using Illumina Human 1Mv1_C BeadChips. Genotypic data cleaning and quality control details have been reported for the Yale-Penn studies19,23,24 and SAGE.21,22