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Chunk #4 — Introduction

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Meta-GWAS Accuracy and Power (MetaGAP) Calculator Shows that Hiding Heritability Is Partially Due to Imperfect Genetic Correlations across Studies.
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In an empirical application, we use genomic-relatedness-matrix restricted maximum likelihood (GREML) to estimate the SNP-based heritability (hSNP2) and CGR of several polygenic traits across three distinct studies: the Rotterdam Study (RS), the Swedish Twin Registry (STR), and the Health and Retirement Study (HRS). For self-rated health, years of education, BMI, and height, we obtain point-estimates of CGR between 0.47 and 0.97. Based on these estimates of hSNP2 and CGR, we use the MetaGAP calculator to quantify the expected number of hits and predictive accuracy of the PGS in recent GWAS efforts for these traits. Our theoretical predictions align with empirical observations.