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Chunk #12 — DATABASE CONTENTS

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F-SNP: computationally predicted functional SNPs for disease association studies.
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The F-SNP database, release 1.0 (August 2007), contains the assessed functional information for 559 322 SNPs within 18 282 candidate genes for 85 human diseases. Detailed statistics of the current F-SNP database are provided in Table 2. The database will be continuously updated to provide functional information about additional SNPs. Table 2.Statistics of functionally assessed SNPs in F-SNP, Release 1.0 (August 2007)Functional categoryNumber of assessed SNPsNumber of potentially deleterious SNPsProtein coding154 14066 899Splicing regulation73 0518 075Transcriptional Regulation453 71078 296Post-translation64 7364 477Total559 322115 356For each functional category, the number of SNPs for which the function has been assessed using the 16 tools and databases integrated into F-SNP is shown in the middle column. The number of SNPs indicated by F-SNP to be potentially deleterious is shown on the right.