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Chunk #36 — ONLINE METHODS — Data acquisition, quality control, and normalization — RNA-Seq data.

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Integrative transcriptome analyses of the aging brain implicate altered splicing in Alzheimer's disease susceptibility.
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Alzheimer’s cases. The remaining samples were sequenced with target coverage of 50M reads; the mean coverage for the samples passing QC is 95 million reads (median 90 million reads). The libraries were constructed and pooled according to the RIN scores such that similar RIN scores would be pooled together. Varying RIN scores result in a larger spread of insert sizes during library construction and leads to uneven coverage distribution throughout the pool.