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Chunk #42 — Discussion

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Causal associations between risk factors and common diseases inferred from GWAS summary data.
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results based on larger sample sizes. Fourth, our analyses ignored age-specific and sex-specific effects because of the lack of data from age- and sex-stratified analyses. Lastly, we have shown in a previous study that the SMR test-statistic is slightly deflated due to the use of a Taylor series expansion to compute an approximated sampling variance based on summary data, especially if the association between the instrument and risk factor is not strong enough. We therefore strongly recommend that only SNPs that are associated with the exposure at a genome-wide significance level (i.e., 5×10−8) should be used in GSMR analysis, and as a rule of thumb advise application only when there are 10 or more independent (e.g., r2 < 0.05) genome-wide significant SNPs.