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Chunk #70 — Methods — Evolutionary genetics of individuals with diverse ancestry — Haplotype sharing

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Sequencing of 53,831 diverse genomes from the NHLBI TOPMed Program.
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We divided the data by study and by population group within each study. In the analyses of IBD sharing levels and recent effective size, we did not include studies without appropriate consent or population groups with fewer than 80 individuals within a study. We calculated the total length of IBD segments for each pair of individuals, and we averaged these totals within each population group in a study and between each pair of population-by-study groups. We also estimated recent effective population sizes for each group using IBDNe104.