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Chunk #13 — Materials and methods — Parallel ICA and alcohol/structure factor association with CNVs

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Association of genetic copy number variations at 11 q14.2 with brain regional volume differences in an alcohol use disorder population.
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ICA (Bell & Sejnowski, 1995) is a procedure to reconstruct a group of statistically independent components from a set of linearly mixed observations. Mathematically this can be written as X = AS, where X represents our observations, in this case regionally segmented brain volumes or multiple AUD assessments from each subject. S represents the latent, statistically independent components and each component in this study is a network from covaried brain regions or a factor from co-varied AUD assessments across subjects. The loading coefficients, A, represent how each of these components is represented in the subjects.