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Chunk #13 — Methods

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Guidelines for Evaluating the Comparability of Down-Sampled GWAS Summary Statistics.
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with deviating down-sampled GWAS coefficients. The regression analysis of the down-sampled coefficients on the full-data coefficients should investigate whether (a) the intercept is zero, (b) whether the regression coefficient is unity (i.e., diagonal line), and (c) whether the adjusted coefficient of determination (adj. R2) is high. These checks are applicable to both univariate and multivariate GWAS (thus, also in Step 3). Here, because we did not generate any down-sampled univariate summary statistics to be disseminated, we report these checks only for the down-sampled multivariate GWAS on externalizing.