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Chunk #13 — Materials and methods — Genotyping — AA replication sample

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Genome-wide association analyses suggested a novel mechanism for smoking behavior regulated by IL15.
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DNA was extracted from peripheral blood samples of each participant using a kit from Qiagen Inc. (Valencia, CA). All SNPs were genotyped using the TaqMan SNP Genotyping Assay in a 384-well microplate format (Applied Biosystems, Foster, CA). Briefly, 15 ng of DNA was amplified in a total volume of 7 μl containing an MGB probe and 2.5 μl of TaqMan universal PCR master mix. Allelic discrimination analysis was performed on the ABI Prism 7900HT Sequence Detection System (Applied Biosystems, Foster CA). To ensure the quality of genotyping, SNP-specific control samples were added to each 384-well plate.