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Chunk #74 — Online Methods — 3. Relationship between histone marks, methylation, and DNase

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Integrative analysis of 111 reference human epigenomes.
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The distribution of DNA methylation (percent CpG methylation from WGBS data) and DNA accessibility (DNase-seq -log10(p-value) signal confidence scores) was computed using regions belonging to each of the 15 chromatin states based on the core set of 5 marks across all reference epigenomes for which these datasets were available. (Fig. 4d,e).