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Chunk #5 — DATA AND INTERFACE UPDATES — Genome-wide association studies

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HaploReg v4: systematic mining of putative causal variants, cell types, regulators and target genes for human complex traits and disease.
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GWAS were obtained from the EBI-NHGRI GWAS Catalog (17) (downloaded 30 October 2015). When there were multiple GWAS for the same trait, a trait-wide pruning was performed to retain only the strongest (lowest P-value) GWAS result from all studies on that trait, when two results from different studies were overlapping or within one megabase of each other.