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Chunk #11 — METHODS — QUANTITATIVE TRAIT

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A comparison of approaches to account for uncertainty in analysis of imputed genotypes.
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We generated phenotype values on each of the n individuals for a large and small sample (n = 1,000, 50), conditional on their simulated genotypes. We simulated trait values separately for four genetic models, with varying degrees of dominance, and also for a null model where genotypes and phenotypes were independent.