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Chunk #22 — INTRODUCTION — Experimental design — Clonal isolation of cell lines

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Genome engineering using the CRISPR-Cas9 system.
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Isolation of clonal cell lines with specific modifications is often desired. This can be achieved after transfection by isolating single cells through either FACS (Steps 54–65) or serial dilutions (Steps 66–70), followed by an expansion period to establish a new clonal cell line. It is worth noting that cell types can vary substantially in their responses to single-cell isolation, and literature specific to the cell type of interest should be consulted.