We re-analyzed the PGC schizophrenia data using 1000 Genomes imputation (8,832 cases and 12,067 controls, excluding Swedish samples). 17 Five regions met genome-wide significance: the MHC locus (chr6:27,261,324-32,610,445, minimum P=2.18×10−10), AS3MT-CNNM2-NT5C2 (chr10:104,635,103-104,960,464, minimum P=4.29×10−10), MAD1L1 (chr7:2,005,747-2,098,238, minimum P=2.40×10−8), RP11-586K2.1, (chr8:89,585,639-89,760,620, minimum P=2.37×10−8), and SNPs nearTCF4 (chr18:53,311,001-53,423,307, minimum P=3.00×10−8).
