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Chunk #5 — Introduction

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Guidelines for Evaluating the Comparability of Down-Sampled GWAS Summary Statistics.
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Therefore, we developed the following six steps to investigate the robustness of down-sampling and applied them to our scenario of assessing the impact of excluding restricted data from the original study on externalizing (Karlsson Linnér et al. 2021). As an initial check, we recommend that authors who generate and share down-sampled summary statistics report whether the genetic correlation between the full and down-sampled version is less than unity, suggesting an imperfect overlap of GWAS coefficients and genetic etiology. The greater the discrepancy between the genetic correlation of the full and down-sampled GWASs on the same trait, the more important it is to evaluate the comparability of down-sampled analyses.