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Chunk #40 — Key Considerations for Characterization and Discovery — Assessing Statistical Significance and Evidence for Interaction

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Gene-environment interactions in cancer epidemiology: a National Cancer Institute Think Tank report.
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As an alternative to a set threshold, participants discussed a recently published set of guidelines for a standardized and transparent assessment of the evidence of GxE interactions [Boffetta, et al. 2012]. A true GxE interaction is more likely to have strong evidence, replication, protection from bias, and high prior plausibility [Boffetta, et al. 2012]. However, some participants noted these guidelines do not fully address complex issues such as when the multiplicative joint effects are are null for a multiplicative null model but truly interactive compared to an additive null. and exposure-related population stratification. Further, because so much about human physiology is unknown, it is difficult to calibrate the level of a priori knowledge, particularly for agnostic genome-wide approaches.