The importance of ascertainment is highlighted by these analyses. When we analyzed the association between the schizophrenia polygenic risk score and a specific substance use disorder diagnosis that was aligned with ascertainment, the associations were robust. Similarly, when the data were mega-analyzed comparing any substance use disorder versus no substance use disorder, a strong association with the schizophrenia polygenic risk scores was seen. In contrast, analyses in the individual datasets showed minimal or no statistically significant associations between specific substance use disorder diagnoses for non-ascertained substances and the polygenic risk score for schizophrenia.