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Chunk #12 — 2 The user perspective — 2.3 Annotation packages and resources

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Orchestrating high-throughput genomic analysis with Bioconductor.
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The AnnotationHub resource provides ready access to more than 10,000 genome-scale assay and annotation data sets obtained from Ensembl, ENCODE, dbSNP, UCSC and other sources and delivered in an easy-to-access format (e.g., Ranges-compatible, where appropriate). Bioconductor also supports direct access to underlying file formats such as GTF, 2bit or indexed FASTA.