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Chunk #15 — Methods and Materials — RNA Isolation and Quantitative Real-Time PCR

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The Creb1 coactivator Crtc1 is required for energy balance and fertility.
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RNA was isolated from cells using an RNeasy kit (Qiagen) according to the manufacturer’s protocol. For tissue, animals were anesthetized (350 μg/kg chloral hydrate, i.p.) and the relevant tissue or brain region was rapidly dissected out and snap-frozen in liquid N2 or immersed in RNA later for 12 to 16h at 4°C. Total RNA was isolated from the tissue using Trizol reagent (Invitrogen) according to the manufacturer’s protocol. Total RNA was then treated with DNase (RNase-Free; Roche) and post-cleaned using an RNeasy kit (Qiagen). 1 μg of total RNA was reverse-transcribed to cDNA using Superscript III (Invitrogen) and random hexamers. cDNAs from samples were amplified and detected using SYBR Green I reagent (Roche) and a LightCycler 480 Instrument (Roche), respectively. Quantification of mRNA levels was performed using the LightCycler 480 Software (Roche) using standard curves and normalizing to β-Actin or L32 expression.