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Chunk #36 — Methods (full – for online materials) — Expression quantification of bidirectionally transcribed loci and prediction of enhancers

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An atlas of active enhancers across human cell types and tissues.
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Bidirectional loci were further filtered to have low, non-promoter-like, directionality scores (abs(D) < 0.8) and to be located distant to TSSs and exons of protein- and non-coding genes (see ‘Proof of concept analysis’ above for details). This resulted in a final set of 43,011 putative enhancers.