in ‘advanced options panel’Validation: Algorithm name (citation)Assigned based on query weightsUnregularized (5)GM-2008 (1)Gene Ontology-based weighting: BP, MF & CCSW (5)Equal weighting: equal by networkUniform (5) Table 2.GeneMANIA associated resourcesResourceLocationDescriptionGeneMANIA Cytoscape appCytoscape app storeDesktop app with all GeneMANIA functionality as well as current and archival dataAlso see (Montojo et al., 2010)Command line toolshttp://pages.genemania.org/tools/Tools for running GeneMANIA in offline, cross-validation mode; also for building and supplementing GeneMANIA data setsBulk data downloadhttp://pages.genemania/data/Description of data formats and links to archived and current data set bulk downloadsGeneMANIA announcementsGoogle group: genemania-announceGeneMANIA news and announcements of new releases.Twitter: @genemaniaBug reports and GeneMANIA questionshttp://pages.genemania.org/contact/Form to contact GeneMANIA development teamGeneMANIA data reportshttp://www.genemania.org/data_reports/Compares data releases in terms of numbers of networks, GO annotations and identifiers
