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Chunk #25 — RESULTS AND DISCUSSION — Simulated data

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Classification and selection of biomarkers in genomic data using LASSO.
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the fold change was only a 1.5 unit difference in mean. For each simulation setting, 100 datasets were generated, and the classification error rates were estimated using three-fold cross-validation. No optimization was performed; we set λ = 10. The results are summarized in Table 1. Based on the table, we find that for larger sample sizes and larger effect sizes, as well as larger numbers of effects, the error rates are smaller.