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Chunk #10 — Results — Conceptual frameworks

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Polygenic prediction via Bayesian regression and continuous shrinkage priors.
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Individual-level Bayesian regression models (1) with a prior on SNP effect sizes can often be approximated using an external LD reference panel and turned into summary statistics based methods4,6,21,22. Here we enable posterior inference of SNP effect sizes from GWAS summary statistics under continuous shrinkage priors using an efficient Gibbs sampler with multivariate block update of the effect sizes (see Methods section).