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Chunk #53 — Methods — Proteomics — LC-MS/MS — TMT-based analysis

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Common genetic variation drives molecular heterogeneity in human iPSCs.
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yes

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cycle. The survey scan is acquired in the orbitrap covering the m/z range from 400 to 1400 Th, with a mass resolution of 120,000 and an automatic gain control (AGC) target of 2.0 e5 ions. The most intense ions were selected for fragmentation using CID in the ion trap with 30 % CID collision energy and an isolation window of 1.6 Th. The AGC target was set to 1.0 e4 with a maximum injection time of 70 ms and a dynamic exclusion of 80 s.