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Chunk #60 — Methods — Comparison of GIANT and UK Biobank GWAS results

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The UK Biobank resource with deep phenotyping and genomic data.
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In our analysis, we first defined a set of 575 non-overlapping regions associated with standing height using a procedure based on that used previously15 (see Supplementary Information). For each study, we carried out two separate analyses to find credible sets in these regions: (A) using all the markers in each study (768,502 in UK Biobank imputed data; 106,263 in GIANT); and (B) using only those markers in both studies (105,421).