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Chunk #65 — STAR METHODS — METHOD DETAILS — Immunoblotting and protein quantifications — Gene Expression Analyses

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ApoE2, ApoE3, and ApoE4 Differentially Stimulate APP Transcription and Aβ Secretion.
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To determine the mRNA levels of genes of interest in cultured cells, quantitative RT-PCR measurements were performed on total RNA (isolated with PrepEase RNA Spin Kit, Affymetrix) using TaqMan probes with VeriQuest Probe One-Step qRT-PCR Master Mix (Affymetrix) and an Applied Biosystems 7900HT apparatus. The pre-designed TaqMan primer/probe sets were purchased from Integrated DNA Technologies and tested to show no or minimal cross-species reactivity in pure human neuronal and mouse glial cultures (Fig. S1B, S2A). MAP2 and GAPDH were used as endogenous reference genes.