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Chunk #57 — Discussion

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WGCNA: an R package for weighted correlation network analysis.
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a module (e.g. a putative pathway) is associated with a disease outcome. Since correlation networks are based on correlations between quantitative variables, one can use a correlation test p-value [1] or a regression-based p-value for assessing the statistical significance between pairs of variables. For example, it is straightforward to attach a significance level to the fuzzy module membership measures Kcor,i(q). The relationship between standard microarray data mining techniques and gene co-expression network analysis is discussed in [11].