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Chunk #10 — MATERIALS AND METHODS — Model creation and evaluation

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KinasePhos 2.0: a web server for identifying protein kinase-specific phosphorylation sites based on sequences and coupling patterns.
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during the cross-validation processes. The cross-validation is performed for 30 times. The following measures of predictive performance of the trained models are defined: Precision (Prec) = TP/(TP + FP), Sensitivity (Sn) = TP/(TP + FN), Specificity (Sp) = TN/(TN + FP) and Accuracy (Acc) = (TP + TN)/(TP + FP + TN + FN), where TP, TN, FP and FN are true positive, true negative, false positive and false negative predictions, respectively.