Chunk #44 — Experimental Procedures — Determination of allelic imbalance (AI) and correlation with risk allele status

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Integrative eQTL-based analyses reveal the biology of breast cancer risk loci.

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For each of the three breast cancer risk loci and corresponding TF, we assessed the association between μij and the heterozygosity (AB vs. AA and BB) using F-test p values (Figure S3, related to Figure 3).