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Chunk #12 — 2. MATERIALS AND METHODS — 2.2. Association analysis — 2.2.2. Family-based association tests in the Australian family replication sample

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NKAIN1-SERINC2 is a functional, replicable and genome-wide significant risk gene region specific for alcohol dependence in subjects of European descent.
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false positive findings. Meta-analysis was performed to derive the combined p values between European-American discovery sample and Australians using the program METAL. An overall z-statistic and p-value for each SNP were calculated from a weighted sum of the individual statistics. Weights were proportional to the square-root of the number of individuals examined in each sample and selected such that the squared weights sum to 1.0. For these meta-analysis results, the genome-wide Bonferroni-corrected α was set at 5×10−8 (by one million markers) and the region- and cohort-wide corrected α was set at 1.7×10−5 (by 139 effective markers; see Table S25).