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Chunk #13 — Methods and Results — Bivariate analysis (traits measured on different sets of individuals)

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Statistical power to detect genetic (co)variance of complex traits using SNP data in unrelated samples.
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Analogous to the univariate analysis, estimation of genetic covariance by a bivariate mixed linear model analysis is asymptotically equivalent to the following linear regression model(9)where i.e. the product of phenotypes between the i-th individual in set #1 and the j-th individual in set #2, and is the ij-th element of the GRM A 12, i.e. the genetic relationship between the i-th individual in set 1 and the j-th individual in sample set #2. The regression coefficient is equivalent to genetic covariance between the two traits becauseIf the two sample sets are independent and phenotypes for both traits have been standardized with mean of 0 and variance of 1, then and . Since is small, . We then have .