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Chunk #9 — Subjects and methods — Quality control

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Imputation across genotyping arrays for genome-wide association studies: assessment of bias and a correction strategy.
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Subjects were further evaluated for population structure to identify ancestral outliers using HapMap populations of European Americans (denoted CEU), Africans (denoted YRI), and Chinese (denoted CHB) for comparison in the STRUCTURE program (Pritchard et al. 2000). African American subjects having <60 % African ancestry were excluded. No European Americans were excluded due to ancestral misclassification.