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Chunk #6 — METHOD — Gene pathway analysis and test subgroups

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Distribution of disease-associated copy number variants across distinct disorders of cognitive development.
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Gene groups were analyzed by hypergeometric statistical methods using the Database for Annotation, Visualization and Integrated Discovery v6.7 software.35 DAVID parameters used the recommended Gene Ontology categories (GOTERM_BP_FAT, GOTERM_CC_FAT, and GOTERM_MF_FAT) with “high” classification stringency to ensure a strong association between genes. An additional pathway analysis investigated if there were differences in gene ontology depending on CNV type. Three CNV categories were defined: A, B, and C (Figure S2, available online).