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Chunk #16 — Methods — The Genetics of Hypertension Associated Treatments (GenHAT) Study

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Development and validation of a trans-ancestry polygenic risk score for type 2 diabetes in diverse populations.
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GenHAT [29] is an ancillary study of the Antihypertensive and Lipid-Lowering Treatment to Prevent Heart Attack Trial (ALLHAT). ALLHAT [34] was a randomized, double-blind, multicenter clinical trial with over 42,000 high-risk individuals who had hypertension, aged 55 years or older, and had at least one additional risk factor for cardiovascular disease (CVD). ALLHAT is the largest antihypertensive treatment trial to date and was ethnically diverse, enrolling over 15,000 self-reported Black subjects. Participants were randomized into four groups defined by the class of assigned antihypertensive medication including chlorthalidone, lisinopril, amlodipine, and doxazosin at a ratio of 1.7:1:1:1. Due to a significant increase of major CVD outcomes compared to participants on chlorthalidone, doxazosin was discontinued. The original GenHAT study (N=39,114) evaluated the effect of the interaction between candidate hypertensive genetic variants and different antihypertensive treatments on the risk of fatal and non-fatal CVD outcomes. Genotyping was performed using Illumina Infinium Multi-Ethnic AMR/AFR BeadChip (MEGA) arrays on 7546 Black adults who were hypertensive and randomized to either chlorthalidone or lisinopril. Imputation was performed using version r2 of the NHLBI TOPMed reference panel. Participants