Recently, Ward and Kellis (2012) published the HaploReg database which aims to provide a similar annotation by providing an intersect of SNVs with chromatin state (Ernst and Kellis 2010). Our database provides additional information well beyond this by prioritizing SNVs within general regulatory regions based on specific TF, chromatin, eQTL, and PWM information. Furthermore, we allow for a query of personal SNPs which account for a large proportion of variation in the population.
