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Chunk #33 — Discussion

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Uncovering hidden variance: pair-wise SNP analysis accounts for additional variance in nicotine dependence.
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by rs588765. The logistic regression interaction term in this analysis was not significant. The explanation for these results is that the risk alleles for the two loci are negatively correlated. As a result, in a univariate analysis, the association of rs16969968 to nicotine dependence is present, but dampened, while the effect of the second locus is almost completely masked until jointly analyzed.