GWAS results for attention deficit hyperactivity disorder [31], anorexia nervosa [32], autism spectrum disorder [33], bipolar disorder [34], major depressive disorder [35], neuroticism [26], schizophrenia [36], body mass index [39], coronary artery disease [40], inflammatory bowel disease [41], height [42], and type 2 diabetes [43] were downloaded, and the P values for all variants were reformatted as input to GARFIELD. All 5% FDR eQTLs for eTranscripts were used to define an annotation category. We tested for enrichment in fetal brain eQTLs of variants associated with each trait at multiple significance thresholds (P < 5 × 10− 5, 5 × 10− 6, 5 × 10− 7, 5 × 10− 8). In total, we tested 12 traits and 4 significance thresholds, highlighting enrichments that surpassed the Bonferroni corrected threshold P < 0.001.
