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Chunk #2 — METHODS — Replication study subjects, genotyping and analysis

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Ulcerative colitis-risk loci on chromosomes 1p36 and 12q15 found by genome-wide association study.
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Two independent replication samples were included in the second stage of our study (see Supplementary Table 1 online). A North American replication sample consisted of 769 patients with UC and 727 controls, all of white, non-Jewish, non-Hispanic, European ancestry. The second replication sample consisted of 633 patients with UC and 415 controls from southern Italy.