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Chunk #46 — Materials and Methods — Microarray design, RNA sample preparation, hybridization, and expression analysis.

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Mapping the genetic architecture of gene expression in human liver.
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and again scanned using a confocal laser scanner. Arrays were quantified on the basis of spot intensity relative to background, adjusted for experimental variation between arrays using average intensity over multiple channels, and fitted to a previously described error model to determine significance (type I error) [42]. Gene expression measures are reported as the ratio of the mean log10 intensity (mlratio).