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Chunk #50 — Methods (full – for online materials) — RNA-seq samples and library preparation

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An atlas of active enhancers across human cell types and tissues.
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Prior to preparation of sequencing libraries, rRNA was removed by poly(A)+ selection (CD19+ B-cells, CD8+ T-cells, 500 ng) or rRNA depletion (fetal heart, 1 ug). Poly(A)+ selection was done twice by using Dynabeads Oligo(dT)25 (Life Technologies) according to the manufacturer's manual. rRNA depletion was done by using Ribo-Zero rRNA removal kit (Epicentre, Illumina) according to the manual. The treated RNA was dissolved in 20 μL water.