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Chunk #16 — 2. Methods — 2.3. Procedures — 2.3.1 MR acquisition

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Altered white matter microstructure in adolescent substance users.
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Participants were imaged in a 3T General Electric Excite MR system with an 8-channel phase-array head coil (General Electric Medical System, Milwaukee, WI, USA). A scout scan ensured good head placement and whole-brain coverage. Diffusion-weighted images were collected along 15 noncollinear directions determined by the electrostatic repulsion model which minimizes bias in measurements by sampling with approximately uniform distribution on a sphere (Jones et al., 1999), in addition to a reference image with no diffusion weighting (b=0). The diffusion encoding scheme consisted of a single-shot dual spin echo excitation optimized for minimum TE and reduction of eddy current artifacts (Reese et al., 2003). The following sequence parameters were applied and averaged over four volumes: TE/TR=93/12,000 ms, FOV=240 mm, matrix =128×128, 36 contiguous slices, 3 mm slice thickness, b-value=2000 s/mm2. Two field maps were collected for unwarping (TE/TR=3.8/1,000 ms) to correct for signal loss and geometric distortion due to B0 field inhomogeneities (Andersson and Skare, 2002; Jezzard and Balaban, 1995).