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Chunk #3 — Background

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In search of causal variants: refining disease association signals using cross-population contrasts.
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works on the hypothesis that important biological mechanisms underlying disease are shared in common across human populations, although differences in allele frequencies at risk loci can lead to differences in prevalence in the different populations. When a risk allele has similar biological mechanism and exerts a similar effect on phenotype across these different populations, the contrasting linkage disequilibrium patterns in these populations can then be leveraged to narrow down the source of the association and identify the functional variant.