Chunk #54 — Online Methods — 1. Data matrix, primary analysis and processing, quality control — 1.2 ChIP-seq and DNase-seq uniform reprocessing for consolidated epigenomes — c. Peak Calling
Narrow peaks and broad domains were also generated for the unconsolidated, 36 bp mappability filtered histone mark ChIP-seq and DNase-seq Release 9 datasets using MACSv2.0.10 with the same settings as specified above.
