We now extend the results from Figure 1 to the full set of HapMap 3 panels and a competing imputation method. We chose to compare against Beagle (Browning and Browning 2009) because past studies showed that it could achieve competitive speed and accuracy with large reference panels (Browning and Browning 2009; Howie et al. 2009; Jostins et al. 2011).
