Chunk #13 — METHODS — ANALYSIS

Source

Interplay of genetic risk factors (CHRNA5-CHRNA3-CHRNB4) and cessation treatments in smoking cessation success.

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We used PLINK(35) to estimate haplotype probabilities for each individual. We assumed that pairs of haplotypes in an individual are “additive”. The posterior probability for the haplotypes was 1 for over 99% of the haplotypes. Dummy coding for different haplotypes was used.